Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BEST2Q8NFU1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 NFIC-211ENST00000641145 8399 ntBASIC17.15■□□□□ 0.34
BEST2Q8NFU1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SPDYE19P-201ENST00000338590 713 ntBASIC17.15■□□□□ 0.34
BEST2Q8NFU1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 GNAQP1-201ENST00000444815 1067 ntBASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AP005018.1-201ENST00000525475 301 ntBASIC17.15■□□□□ 0.34
BEST2Q8NFU1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.15■□□□□ 0.34
BEST2Q8NFU1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 TARDBPP1-201ENST00000442013 1203 ntBASIC17.14■□□□□ 0.33
BEST2Q8NFU1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 AC092337.1-201ENST00000568699 1129 ntBASIC17.14■□□□□ 0.33
BEST2Q8NFU1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
BEST2Q8NFU1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 CDC14C-201ENST00000428251 1719 ntBASIC17.13■□□□□ 0.33
BEST2Q8NFU1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 AC007541.1-201ENST00000570282 1469 ntBASIC17.13■□□□□ 0.33
BEST2Q8NFU1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BEST2Q8NFU1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms