Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LSMEM1Q8N8F7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AC022532.1-201ENST00000624563 1728 ntBASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AL022342.1-201ENST00000400363 863 ntBASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 MIR940-201ENST00000401276 94 ntBASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AC079140.1-201ENST00000508039 487 ntBASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LSMEM1Q8N8F7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 HLA-H-201ENST00000383620 1096 ntBASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AC004987.2-201ENST00000395959 1148 ntBASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 KRT8P48-201ENST00000515599 1220 ntBASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LSMEM1Q8N8F7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms