Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 AC127383.1-201ENST00000444697 1800 ntBASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 FGFR3P6-201ENST00000457012 610 ntBASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NANOGP1Q8N7R0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 AC104581.4-201ENST00000623126 3052 ntBASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 IER3-202ENST00000376377 1350 ntBASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NANOGP1Q8N7R0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 LAGE3P1-201ENST00000425356 484 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 GPX1P2-201ENST00000429271 606 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC025062.2-201ENST00000605477 670 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC008667.4-201ENST00000607370 168 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AL732292.2-201ENST00000609649 430 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NANOGP1Q8N7R0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms