Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAM1L1Q8N609 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 TSPY16P-201ENST00000449843 468 ntBASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AC135586.1-201ENST00000539323 574 ntBASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AC004840.1-201ENST00000636359 365 ntBASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AL607033.1-201ENST00000623900 1599 ntBASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAM1L1Q8N609 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms