Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ALOX12P2-203ENST00000570921 1945 ntBASIC21.65■■□□□ 1.06
XRN1Q8IZH2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
XRN1Q8IZH2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 RPL17P11-201ENST00000417593 544 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 FTLP1-201ENST00000449155 526 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 AC024681.1-201ENST00000521917 487 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 MIR4783-201ENST00000580343 82 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 MIR4313-201ENST00000580760 101 ntBASIC21.64■■□□□ 1.06
XRN1Q8IZH2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
XRN1Q8IZH2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21.64■■□□□ 1.05
XRN1Q8IZH2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AL133499.1-201ENST00000596207 608 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AC025181.2-201ENST00000606994 802 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AP003419.4-201ENST00000616071 517 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AC011477.6-201ENST00000604980 1927 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AC106886.4-201ENST00000623557 2502 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 PRKXP1-201ENST00000561423 1122 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 MIR3907-201ENST00000579424 151 ntBASIC21.63■■□□□ 1.05
XRN1Q8IZH2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
XRN1Q8IZH2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 AC114812.1-204ENST00000449669 728 ntBASIC21.62■■□□□ 1.05
XRN1Q8IZH2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 OR10B1P-201ENST00000601666 907 ntBASIC21.62■■□□□ 1.05
XRN1Q8IZH2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms