Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AL592424.1-201ENST00000563624 1536 ntBASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 RPL37AP1-201ENST00000412502 279 ntBASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AL133215.2-201ENST00000609242 977 ntBASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 ME2P1-201ENST00000426028 1970 ntBASIC15.75■□□□□ 0.11
TRIM48Q8IWZ4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 RN7SL618P-201ENST00000477850 296 ntBASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 LINC02084-201ENST00000606069 1096 ntBASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.74■□□□□ 0.11
TRIM48Q8IWZ4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AC092850.2-201ENST00000623821 2697 ntBASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AC004890.2-204ENST00000481968 304 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms