Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 AP005117.1-202ENST00000581724 1908 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SPDYE7P-202ENST00000420373 878 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 AL139010.1-201ENST00000454878 894 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 AC025678.2-201ENST00000562061 970 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SPDYE12P-201ENST00000618416 771 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB11FIP4Q86YS3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB11FIP4Q86YS3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 AC022188.1-201ENST00000620960 1664 ntBASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 AC092850.2-201ENST00000623821 2697 ntBASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 TREML5P-201ENST00000421694 576 ntBASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 AC093512.1-201ENST00000617969 520 ntBASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RAB11FIP4Q86YS3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 CNN2P2-201ENST00000443536 909 ntBASIC18.75■□□□□ 0.59
RAB11FIP4Q86YS3 CNN2P3-201ENST00000450201 906 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms