Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 AL450472.2-201ENST00000603663 1156 ntBASIC16.02■□□□□ 0.16
USP45Q70EL2 AL844908.2-201ENST00000609461 460 ntBASIC16.02■□□□□ 0.16
USP45Q70EL2 AJ011932.1-201ENST00000621707 465 ntBASIC16.02■□□□□ 0.16
USP45Q70EL2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.02■□□□□ 0.16
USP45Q70EL2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.02■□□□□ 0.16
USP45Q70EL2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 AC026691.1-201ENST00000602502 2017 ntBASIC16.02■□□□□ 0.15
USP45Q70EL2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
USP45Q70EL2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.02■□□□□ 0.15
USP45Q70EL2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
USP45Q70EL2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.02■□□□□ 0.15
USP45Q70EL2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
USP45Q70EL2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 AC022144.1-201ENST00000602255 1580 ntBASIC16.01■□□□□ 0.15
USP45Q70EL2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.01■□□□□ 0.15
USP45Q70EL2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 AZGP1P1-201ENST00000411909 902 ntBASIC16.01■□□□□ 0.15
USP45Q70EL2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.01■□□□□ 0.15
USP45Q70EL2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.01■□□□□ 0.15
USP45Q70EL2 HIST3H2BA-201ENST00000436555 524 ntBASIC16.01■□□□□ 0.15
USP45Q70EL2 HMGN1P19-201ENST00000436976 333 ntBASIC16.01■□□□□ 0.15
USP45Q70EL2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.01■□□□□ 0.15
USP45Q70EL2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.01■□□□□ 0.15
USP45Q70EL2 ZNF890P-202ENST00000530367 1156 ntBASIC16.01■□□□□ 0.15
USP45Q70EL2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.01■□□□□ 0.15
USP45Q70EL2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.01■□□□□ 0.15
USP45Q70EL2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
USP45Q70EL2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16■□□□□ 0.15
USP45Q70EL2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16■□□□□ 0.15
USP45Q70EL2 AC009477.1-201ENST00000452936 217 ntBASIC16■□□□□ 0.15
USP45Q70EL2 PHKG1P2-201ENST00000457537 863 ntBASIC16■□□□□ 0.15
USP45Q70EL2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 SPCS2P1-201ENST00000561636 679 ntBASIC16■□□□□ 0.15
USP45Q70EL2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16■□□□□ 0.15
USP45Q70EL2 AL096865.1-201ENST00000606796 927 ntBASIC16■□□□□ 0.15
USP45Q70EL2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
USP45Q70EL2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
USP45Q70EL2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
USP45Q70EL2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.99■□□□□ 0.15
USP45Q70EL2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.99■□□□□ 0.15
USP45Q70EL2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.99■□□□□ 0.15
USP45Q70EL2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.99■□□□□ 0.15
USP45Q70EL2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
USP45Q70EL2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
USP45Q70EL2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
USP45Q70EL2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms