Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 BTBD7P1-201ENST00000447253 1453 ntBASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 AC009407.1-201ENST00000568958 598 ntBASIC17.02■□□□□ 0.32
VSTM1Q6UX27 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 LINC02560-201ENST00000596379 459 ntBASIC17.02■□□□□ 0.32
VSTM1Q6UX27 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 AL033527.5-202ENST00000641632 1098 ntBASIC17.02■□□□□ 0.32
VSTM1Q6UX27 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VSTM1Q6UX27 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.02■□□□□ 0.31
VSTM1Q6UX27 AL136982.4-201ENST00000437689 1740 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AC004987.2-201ENST00000395959 1148 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 FO393414.2-201ENST00000405153 598 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AL512361.1-201ENST00000554200 418 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AC243562.2-201ENST00000561247 970 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AC010336.2-201ENST00000564226 506 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 MIR6069-201ENST00000620069 79 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 AL691432.1-201ENST00000596308 1422 ntBASIC17.01■□□□□ 0.31
VSTM1Q6UX27 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.01■□□□□ 0.31
VSTM1Q6UX27 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17■□□□□ 0.31
VSTM1Q6UX27 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17■□□□□ 0.31
VSTM1Q6UX27 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17■□□□□ 0.31
VSTM1Q6UX27 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSTM1Q6UX27 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
VSTM1Q6UX27 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17■□□□□ 0.31
VSTM1Q6UX27 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms