Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 IGHJ2P-201ENST00000454480 60 ntBASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 MIR4741-201ENST00000579822 90 ntBASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 AC106872.11-201ENST00000605838 421 ntBASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.99■□□□□ 0.31
CNKSR3Q6P9H4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 KRT8P35-201ENST00000483942 1338 ntBASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 AL138709.1-201ENST00000614840 1693 ntBASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 GAPDHP40-201ENST00000505218 1006 ntBASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 AC005695.3-201ENST00000614522 232 ntBASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 PKD1P1-201ENST00000458669 6805 ntBASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNKSR3Q6P9H4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 ELK2AP-201ENST00000392510 1007 ntBASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 MTX1P1-201ENST00000440904 838 ntBASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 RNA5SP486-201ENST00000515961 83 ntBASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 RNA5SP423-201ENST00000517127 109 ntBASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNKSR3Q6P9H4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms