Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AL691432.1-201ENST00000596308 1422 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC061975.2-201ENST00000581722 295 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC099522.2-201ENST00000607001 744 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 AC092127.1-201ENST00000567093 3455 ntBASIC14.94□□□□□ -0.02
REEP3Q6NUK4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
REEP3Q6NUK4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.93□□□□□ -0.02
REEP3Q6NUK4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AL513190.1-201ENST00000621254 727 ntBASIC14.93□□□□□ -0.02
REEP3Q6NUK4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
REEP3Q6NUK4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
REEP3Q6NUK4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms