Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 HOMER2P2-201ENST00000451621 847 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AC023310.1-201ENST00000554836 735 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AL450472.2-201ENST00000603663 1156 ntBASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13DQ5THJ4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 UPF3AP2-201ENST00000457924 1132 ntBASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 MIR4783-201ENST00000580343 82 ntBASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 AC026740.1-201ENST00000607068 791 ntBASIC10.49□□□□□ -0.73
VPS13DQ5THJ4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC126915.1-201ENST00000522847 1038 ntBASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AL023775.1-201ENST00000454907 1746 ntBASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC069218.1-201ENST00000435269 762 ntBASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AC022217.1-201ENST00000521069 738 ntBASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13DQ5THJ4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms