Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
USH1GQ495M9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
USH1GQ495M9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USH1GQ495M9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USH1GQ495M9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 AC063926.2-201ENST00000623766 1308 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.3■□□□□ 0.52
USH1GQ495M9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USH1GQ495M9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.3■□□□□ 0.52
USH1GQ495M9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
USH1GQ495M9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 GAPDHP21-201ENST00000450301 1010 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 PHKG1P2-201ENST00000457537 863 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.3■□□□□ 0.52
USH1GQ495M9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USH1GQ495M9 AL450472.2-201ENST00000603663 1156 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.3■□□□□ 0.52
USH1GQ495M9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.3■□□□□ 0.52
USH1GQ495M9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 AP003680.1-201ENST00000598970 3660 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.3■□□□□ 0.52
USH1GQ495M9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USH1GQ495M9 MTHFR-217ENST00000641820 1569 ntBASIC18.3■□□□□ 0.52
USH1GQ495M9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 COX5BP8-201ENST00000416911 349 ntBASIC18.29■□□□□ 0.52
USH1GQ495M9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.29■□□□□ 0.52
USH1GQ495M9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 MEIS3P1-201ENST00000495167 958 ntBASIC18.29■□□□□ 0.52
USH1GQ495M9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.29■□□□□ 0.52
USH1GQ495M9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.29■□□□□ 0.52
USH1GQ495M9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.29■□□□□ 0.52
USH1GQ495M9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USH1GQ495M9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USH1GQ495M9 AC018695.7-201ENST00000624587 2492 ntBASIC18.29■□□□□ 0.52
USH1GQ495M9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USH1GQ495M9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms