Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 CSF2RBP1-201ENST00000447905 391 ntBASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AL139010.1-201ENST00000454878 894 ntBASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC124947.2-201ENST00000547118 1133 ntBASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTC1Q2NKJ3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 AC079328.2-201ENST00000561241 3354 ntBASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTC1Q2NKJ3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms