Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
DDR1Q08345 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DDR1Q08345 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.57■□□□□ 0.72
DDR1Q08345 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDR1Q08345 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
DDR1Q08345 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDR1Q08345 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.57■□□□□ 0.72
DDR1Q08345 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.57■□□□□ 0.72
DDR1Q08345 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 AP001094.4-201ENST00000579008 2176 ntBASIC19.57■□□□□ 0.72
DDR1Q08345 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
DDR1Q08345 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
DDR1Q08345 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDR1Q08345 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.56■□□□□ 0.72
DDR1Q08345 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
DDR1Q08345 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDR1Q08345 AL138799.1-201ENST00000448213 1675 ntBASIC19.56■□□□□ 0.72
DDR1Q08345 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
DDR1Q08345 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.56■□□□□ 0.72
DDR1Q08345 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 CD8B2-202ENST00000417670 633 ntBASIC19.56■□□□□ 0.72
DDR1Q08345 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.56■□□□□ 0.72
DDR1Q08345 HSPB1P2-201ENST00000448722 546 ntBASIC19.56■□□□□ 0.72
DDR1Q08345 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.56■□□□□ 0.72
DDR1Q08345 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.56■□□□□ 0.72
DDR1Q08345 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDR1Q08345 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.55■□□□□ 0.72
DDR1Q08345 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
DDR1Q08345 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.55■□□□□ 0.72
DDR1Q08345 AL133267.1-201ENST00000398220 340 ntBASIC19.55■□□□□ 0.72
DDR1Q08345 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.55■□□□□ 0.72
DDR1Q08345 CNN2P10-201ENST00000443067 918 ntBASIC19.55■□□□□ 0.72
DDR1Q08345 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 MPRIPP1-201ENST00000452433 1089 ntBASIC19.55■□□□□ 0.72
DDR1Q08345 IMP3P2-201ENST00000489760 475 ntBASIC19.55■□□□□ 0.72
DDR1Q08345 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.55■□□□□ 0.72
DDR1Q08345 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.55■□□□□ 0.72
DDR1Q08345 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.55■□□□□ 0.72
DDR1Q08345 AC097724.1-201ENST00000609581 426 ntBASIC19.55■□□□□ 0.72
DDR1Q08345 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DDR1Q08345 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.55■□□□□ 0.72
DDR1Q08345 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DDR1Q08345 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDR1Q08345 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DDR1Q08345 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.54■□□□□ 0.72
DDR1Q08345 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms