Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 CU639417.3-201ENST00000624240 1404 ntBASIC14.18□□□□□ -0.14
NKX6-1P78426 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 GGT3P-204ENST00000453783 1664 ntBASIC14.18□□□□□ -0.14
NKX6-1P78426 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.18□□□□□ -0.14
NKX6-1P78426 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-1P78426 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-1P78426 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-1P78426 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-1P78426 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-1P78426 FOXO1B-201ENST00000504678 1527 ntBASIC14.18□□□□□ -0.14
NKX6-1P78426 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-1P78426 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-1P78426 AC022144.1-201ENST00000602255 1580 ntBASIC14.17□□□□□ -0.14
NKX6-1P78426 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NKX6-1P78426 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-1P78426 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NKX6-1P78426 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.17□□□□□ -0.14
NKX6-1P78426 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX6-1P78426 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.17□□□□□ -0.14
NKX6-1P78426 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-1P78426 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-1P78426 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-1P78426 AC023824.1-201ENST00000562945 2975 ntBASIC14.17□□□□□ -0.14
NKX6-1P78426 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NKX6-1P78426 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-1P78426 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-1P78426 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-1P78426 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-1P78426 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms