Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
SNRPFP62306 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.3■□□□□ 0.36
SNRPFP62306 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.3■□□□□ 0.36
SNRPFP62306 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.3■□□□□ 0.36
SNRPFP62306 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.3■□□□□ 0.36
SNRPFP62306 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SNRPFP62306 AL844908.2-201ENST00000609461 460 ntBASIC17.3■□□□□ 0.36
SNRPFP62306 AC074044.1-201ENST00000609673 707 ntBASIC17.3■□□□□ 0.36
SNRPFP62306 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SNRPFP62306 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 BTBD7P1-201ENST00000447253 1453 ntBASIC17.3■□□□□ 0.36
SNRPFP62306 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.3■□□□□ 0.36
SNRPFP62306 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNRPFP62306 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNRPFP62306 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SNRPFP62306 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SNRPFP62306 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SNRPFP62306 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 AC105250.1-201ENST00000509378 2057 ntBASIC17.29■□□□□ 0.36
SNRPFP62306 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.29■□□□□ 0.36
SNRPFP62306 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.29■□□□□ 0.36
SNRPFP62306 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.29■□□□□ 0.36
SNRPFP62306 TSSK5P-201ENST00000423978 907 ntBASIC17.29■□□□□ 0.36
SNRPFP62306 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.29■□□□□ 0.36
SNRPFP62306 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 RFPL4AP1-201ENST00000530883 850 ntBASIC17.29■□□□□ 0.36
SNRPFP62306 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.29■□□□□ 0.36
SNRPFP62306 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNRPFP62306 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SNRPFP62306 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.29■□□□□ 0.36
SNRPFP62306 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SNRPFP62306 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNRPFP62306 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNRPFP62306 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.28■□□□□ 0.36
SNRPFP62306 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms