Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP46P62068 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP46P62068 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP46P62068 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP46P62068 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP46P62068 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
USP46P62068 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 AC004987.2-201ENST00000395959 1148 ntBASIC16.83■□□□□ 0.28
USP46P62068 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 AL589987.1-201ENST00000453380 819 ntBASIC16.83■□□□□ 0.28
USP46P62068 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.83■□□□□ 0.28
USP46P62068 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.83■□□□□ 0.28
USP46P62068 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.83■□□□□ 0.28
USP46P62068 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 SPDYE22P-201ENST00000582158 798 ntBASIC16.83■□□□□ 0.28
USP46P62068 AC025048.3-201ENST00000590609 569 ntBASIC16.83■□□□□ 0.28
USP46P62068 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 AL662799.1-202ENST00000614205 422 ntBASIC16.83■□□□□ 0.28
USP46P62068 FER1L4-210ENST00000615531 5998 ntBASIC16.83■□□□□ 0.28
USP46P62068 AC005702.4-201ENST00000618393 416 ntBASIC16.83■□□□□ 0.28
USP46P62068 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
USP46P62068 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
USP46P62068 AC005786.4-201ENST00000623369 682 ntBASIC16.83■□□□□ 0.28
USP46P62068 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP46P62068 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.82■□□□□ 0.28
USP46P62068 AC134407.2-201ENST00000625089 1978 ntBASIC16.82■□□□□ 0.28
USP46P62068 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 AZGP1P1-201ENST00000411909 902 ntBASIC16.82■□□□□ 0.28
USP46P62068 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.82■□□□□ 0.28
USP46P62068 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.82■□□□□ 0.28
USP46P62068 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 SDHAP3-202ENST00000515467 728 ntBASIC16.82■□□□□ 0.28
USP46P62068 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 AC243562.2-201ENST00000561247 970 ntBASIC16.82■□□□□ 0.28
USP46P62068 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 AL132655.2-201ENST00000596276 594 ntBASIC16.82■□□□□ 0.28
USP46P62068 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USP46P62068 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
USP46P62068 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP46P62068 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
USP46P62068 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 AC007541.1-201ENST00000570282 1469 ntBASIC16.81■□□□□ 0.28
USP46P62068 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP46P62068 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP46P62068 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USP46P62068 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP46P62068 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms