Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 PCDHA1-201ENST00000378133 2726 ntBASIC16.06■□□□□ 0.16
AP1S1P61966 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S1P61966 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.06■□□□□ 0.16
AP1S1P61966 MRPS18AP1-201ENST00000414458 589 ntBASIC16.06■□□□□ 0.16
AP1S1P61966 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S1P61966 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
AP1S1P61966 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.06■□□□□ 0.16
AP1S1P61966 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.06■□□□□ 0.16
AP1S1P61966 AL109936.8-201ENST00000641772 604 ntBASIC16.06■□□□□ 0.16
AP1S1P61966 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
AP1S1P61966 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S1P61966 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S1P61966 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
AP1S1P61966 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 AL365203.3-201ENST00000609742 2057 ntBASIC16.06■□□□□ 0.16
AP1S1P61966 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S1P61966 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP1S1P61966 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 AC018892.3-201ENST00000623986 2499 ntBASIC16.05■□□□□ 0.16
AP1S1P61966 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S1P61966 AC114501.2-201ENST00000439631 535 ntBASIC16.05■□□□□ 0.16
AP1S1P61966 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S1P61966 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
AP1S1P61966 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.05■□□□□ 0.16
AP1S1P61966 AC097359.3-201ENST00000603982 1210 ntBASIC16.05■□□□□ 0.16
AP1S1P61966 AC008738.7-201ENST00000609744 511 ntBASIC16.05■□□□□ 0.16
AP1S1P61966 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.05■□□□□ 0.16
AP1S1P61966 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.05■□□□□ 0.16
AP1S1P61966 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S1P61966 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S1P61966 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
AP1S1P61966 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S1P61966 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP1S1P61966 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.04■□□□□ 0.16
AP1S1P61966 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.04■□□□□ 0.16
AP1S1P61966 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.04■□□□□ 0.16
AP1S1P61966 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP1S1P61966 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP1S1P61966 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms