Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.62□□□□□ -0.07
CXCR4P61073 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CXCR4P61073 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CXCR4P61073 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCR4P61073 LAGE3P1-201ENST00000425356 484 ntBASIC14.62□□□□□ -0.07
CXCR4P61073 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCR4P61073 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CXCR4P61073 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 AL365330.1-201ENST00000607459 531 ntBASIC14.62□□□□□ -0.07
CXCR4P61073 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CXCR4P61073 GGTLC5P-201ENST00000617623 998 ntBASIC14.62□□□□□ -0.07
CXCR4P61073 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CXCR4P61073 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CXCR4P61073 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CXCR4P61073 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCR4P61073 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CXCR4P61073 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 AC148477.4-201ENST00000613430 1793 ntBASIC14.61□□□□□ -0.07
CXCR4P61073 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCR4P61073 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 RPS15P9-201ENST00000494093 319 ntBASIC14.61□□□□□ -0.07
CXCR4P61073 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 AC021087.4-201ENST00000563761 564 ntBASIC14.61□□□□□ -0.07
CXCR4P61073 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCR4P61073 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 REXO1L6P-202ENST00000619970 1078 ntBASIC14.61□□□□□ -0.07
CXCR4P61073 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CXCR4P61073 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CXCR4P61073 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CXCR4P61073 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCR4P61073 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCR4P61073 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCR4P61073 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CXCR4P61073 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.6□□□□□ -0.07
CXCR4P61073 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
CXCR4P61073 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
CXCR4P61073 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.6□□□□□ -0.07
CXCR4P61073 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CXCR4P61073 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCR4P61073 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms