Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRPF1P55201 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.31■□□□□ 0.84
BRPF1P55201 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRPF1P55201 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 AC087499.5-201ENST00000452760 1342 ntBASIC20.3■□□□□ 0.84
BRPF1P55201 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.3■□□□□ 0.84
BRPF1P55201 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BRPF1P55201 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.3■□□□□ 0.84
BRPF1P55201 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 AC010336.2-201ENST00000564226 506 ntBASIC20.3■□□□□ 0.84
BRPF1P55201 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 AL844908.2-201ENST00000609461 460 ntBASIC20.3■□□□□ 0.84
BRPF1P55201 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.3■□□□□ 0.84
BRPF1P55201 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BRPF1P55201 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BRPF1P55201 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 AC011270.2-201ENST00000624293 2550 ntBASIC20.3■□□□□ 0.84
BRPF1P55201 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
BRPF1P55201 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRPF1P55201 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 AL607033.1-201ENST00000623900 1599 ntBASIC20.29■□□□□ 0.84
BRPF1P55201 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 TARDBPP1-201ENST00000442013 1203 ntBASIC20.29■□□□□ 0.84
BRPF1P55201 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 SERBP1P3-201ENST00000459980 809 ntBASIC20.29■□□□□ 0.84
BRPF1P55201 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.29■□□□□ 0.84
BRPF1P55201 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 MIR6069-201ENST00000620069 79 ntBASIC20.29■□□□□ 0.84
BRPF1P55201 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.29■□□□□ 0.84
BRPF1P55201 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.29■□□□□ 0.84
BRPF1P55201 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRPF1P55201 AC020658.6-201ENST00000623564 1870 ntBASIC20.28■□□□□ 0.84
BRPF1P55201 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.28■□□□□ 0.84
BRPF1P55201 AC105250.1-201ENST00000509378 2057 ntBASIC20.28■□□□□ 0.84
BRPF1P55201 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 PIN1P1-201ENST00000412108 996 ntBASIC20.28■□□□□ 0.84
BRPF1P55201 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.28■□□□□ 0.84
BRPF1P55201 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.28■□□□□ 0.84
BRPF1P55201 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.28■□□□□ 0.84
BRPF1P55201 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.28■□□□□ 0.84
BRPF1P55201 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BRPF1P55201 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.28■□□□□ 0.84
BRPF1P55201 AL590560.3-201ENST00000623350 461 ntBASIC20.28■□□□□ 0.84
BRPF1P55201 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRPF1P55201 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.28■□□□□ 0.84
BRPF1P55201 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms