Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.27■□□□□ 0.04
NR1H2P55055 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NR1H2P55055 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NR1H2P55055 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 BX842568.4-201ENST00000421222 227 ntBASIC15.27■□□□□ 0.04
NR1H2P55055 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.27■□□□□ 0.04
NR1H2P55055 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.27■□□□□ 0.04
NR1H2P55055 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.27■□□□□ 0.04
NR1H2P55055 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR1H2P55055 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.27■□□□□ 0.04
NR1H2P55055 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NR1H2P55055 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
NR1H2P55055 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
NR1H2P55055 AC005840.4-201ENST00000541242 2494 ntBASIC15.27■□□□□ 0.03
NR1H2P55055 AC005912.2-201ENST00000619492 2400 ntBASIC15.27■□□□□ 0.03
NR1H2P55055 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.27■□□□□ 0.03
NR1H2P55055 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR1H2P55055 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.26■□□□□ 0.03
NR1H2P55055 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NR1H2P55055 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 SPDYE21P-201ENST00000413323 827 ntBASIC15.26■□□□□ 0.03
NR1H2P55055 MED15P5-201ENST00000423150 992 ntBASIC15.26■□□□□ 0.03
NR1H2P55055 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 AC109462.3-201ENST00000573934 613 ntBASIC15.26■□□□□ 0.03
NR1H2P55055 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 AC019129.2-201ENST00000609837 1235 ntBASIC15.26■□□□□ 0.03
NR1H2P55055 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.26■□□□□ 0.03
NR1H2P55055 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NR1H2P55055 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR1H2P55055 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 REXO1L8P-201ENST00000604378 1897 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 AL671710.1-201ENST00000610245 2349 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H2P55055 AL020989.1-201ENST00000422979 469 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H2P55055 BX005266.1-201ENST00000473402 457 ntBASIC15.25■□□□□ 0.03
NR1H2P55055 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H2P55055 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms