Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 TMEM14DP-201ENST00000422205 345 ntBASIC16.61■□□□□ 0.25
EPHB3P54753 AC234783.1-201ENST00000441761 496 ntBASIC16.61■□□□□ 0.25
EPHB3P54753 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.61■□□□□ 0.25
EPHB3P54753 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.61■□□□□ 0.25
EPHB3P54753 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
EPHB3P54753 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
EPHB3P54753 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHB3P54753 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.6■□□□□ 0.25
EPHB3P54753 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHB3P54753 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHB3P54753 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHB3P54753 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 BRI3BPP1-201ENST00000594224 787 ntBASIC16.6■□□□□ 0.25
EPHB3P54753 AC008735.3-201ENST00000596646 500 ntBASIC16.6■□□□□ 0.25
EPHB3P54753 CU634019.7-201ENST00000624153 1185 ntBASIC16.6■□□□□ 0.25
EPHB3P54753 FP236241.2-201ENST00000624906 1185 ntBASIC16.6■□□□□ 0.25
EPHB3P54753 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
EPHB3P54753 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
EPHB3P54753 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
EPHB3P54753 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
EPHB3P54753 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB3P54753 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHB3P54753 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHB3P54753 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
EPHB3P54753 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHB3P54753 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EPHB3P54753 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
EPHB3P54753 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
EPHB3P54753 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHB3P54753 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EPHB3P54753 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.59■□□□□ 0.25
EPHB3P54753 MIR658-201ENST00000385210 100 ntBASIC16.59■□□□□ 0.25
EPHB3P54753 MIR1909-201ENST00000411312 80 ntBASIC16.59■□□□□ 0.25
EPHB3P54753 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.59■□□□□ 0.25
EPHB3P54753 AC134915.1-201ENST00000426461 574 ntBASIC16.59■□□□□ 0.25
EPHB3P54753 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms