Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 AC018892.3-201ENST00000623986 2499 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 AC067930.6-201ENST00000623257 4947 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.45■□□□□ 0.22
ITGA8P53708 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 AC140658.5-201ENST00000438532 169 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 FDX1P1-201ENST00000449115 551 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 AC009078.2-202ENST00000463353 338 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 PRYP6-201ENST00000514804 343 ntBASIC16.45■□□□□ 0.22
ITGA8P53708 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.45■□□□□ 0.22
ITGA8P53708 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.45■□□□□ 0.22
ITGA8P53708 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.45■□□□□ 0.22
ITGA8P53708 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.45■□□□□ 0.22
ITGA8P53708 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.45■□□□□ 0.22
ITGA8P53708 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ITGA8P53708 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ITGA8P53708 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ITGA8P53708 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ITGA8P53708 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.44■□□□□ 0.22
ITGA8P53708 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 PKD1P5-201ENST00000532415 10291 ntBASIC16.44■□□□□ 0.22
ITGA8P53708 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
ITGA8P53708 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.44■□□□□ 0.22
ITGA8P53708 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.44■□□□□ 0.22
ITGA8P53708 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.44■□□□□ 0.22
ITGA8P53708 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 AC023141.13-201ENST00000604991 943 ntBASIC16.44■□□□□ 0.22
ITGA8P53708 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ITGA8P53708 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.44■□□□□ 0.22
ITGA8P53708 AL773604.1-201ENST00000617417 272 ntBASIC16.44■□□□□ 0.22
ITGA8P53708 AC116407.3-201ENST00000623905 1129 ntBASIC16.44■□□□□ 0.22
ITGA8P53708 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ITGA8P53708 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 FAM45BP-202ENST00000592932 1624 ntBASIC16.44■□□□□ 0.22
ITGA8P53708 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.44■□□□□ 0.22
ITGA8P53708 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ITGA8P53708 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
ITGA8P53708 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms