Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.6□□□□□ -0.07
CENPAP49450 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CENPAP49450 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 TPM4P1-201ENST00000436100 807 ntBASIC14.6□□□□□ -0.07
CENPAP49450 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.6□□□□□ -0.07
CENPAP49450 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.6□□□□□ -0.07
CENPAP49450 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 AC007064.4-201ENST00000637740 555 ntBASIC14.6□□□□□ -0.07
CENPAP49450 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CENPAP49450 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.6□□□□□ -0.07
CENPAP49450 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.6□□□□□ -0.07
CENPAP49450 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.6□□□□□ -0.07
CENPAP49450 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.59□□□□□ -0.07
CENPAP49450 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 CDC14C-201ENST00000428251 1719 ntBASIC14.59□□□□□ -0.07
CENPAP49450 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.59□□□□□ -0.07
CENPAP49450 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.59□□□□□ -0.07
CENPAP49450 AC010507.1-201ENST00000633895 436 ntBASIC14.59□□□□□ -0.07
CENPAP49450 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 LINC02228-204ENST00000642115 2962 ntBASIC14.59□□□□□ -0.07
CENPAP49450 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CENPAP49450 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CENPAP49450 LINC02447-202ENST00000501888 2146 ntBASIC14.59□□□□□ -0.07
CENPAP49450 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.59□□□□□ -0.07
CENPAP49450 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CENPAP49450 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.58□□□□□ -0.07
CENPAP49450 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CENPAP49450 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.58□□□□□ -0.07
CENPAP49450 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CENPAP49450 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CENPAP49450 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.58□□□□□ -0.07
CENPAP49450 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CENPAP49450 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CENPAP49450 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.58□□□□□ -0.08
CENPAP49450 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 IGLL3P-201ENST00000412472 434 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms