Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
BRCC3P46736 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCC3P46736 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BRCC3P46736 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BRCC3P46736 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 TMEM14DP-201ENST00000422205 345 ntBASIC16.92■□□□□ 0.3
BRCC3P46736 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.92■□□□□ 0.3
BRCC3P46736 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCC3P46736 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 HILS1-202ENST00000545329 423 ntBASIC16.92■□□□□ 0.3
BRCC3P46736 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BRCC3P46736 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BRCC3P46736 AC036164.1-201ENST00000570544 333 ntBASIC16.92■□□□□ 0.3
BRCC3P46736 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
BRCC3P46736 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.92■□□□□ 0.3
BRCC3P46736 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 AC018695.7-201ENST00000624587 2492 ntBASIC16.92■□□□□ 0.3
BRCC3P46736 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.92■□□□□ 0.3
BRCC3P46736 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRCC3P46736 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.92■□□□□ 0.3
BRCC3P46736 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 TOMM22P5-201ENST00000416399 439 ntBASIC16.91■□□□□ 0.3
BRCC3P46736 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 SLED1-202ENST00000512051 380 ntBASIC16.91■□□□□ 0.3
BRCC3P46736 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.91■□□□□ 0.3
BRCC3P46736 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.91■□□□□ 0.3
BRCC3P46736 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
BRCC3P46736 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.91■□□□□ 0.3
BRCC3P46736 AL008721.1-201ENST00000609964 604 ntBASIC16.91■□□□□ 0.3
BRCC3P46736 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 AL033527.5-201ENST00000641382 801 ntBASIC16.91■□□□□ 0.3
BRCC3P46736 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.91■□□□□ 0.3
BRCC3P46736 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRCC3P46736 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms