Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 AC023274.1-201ENST00000418278 595 ntBASIC16.75■□□□□ 0.27
SLC1A1P43005 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC1A1P43005 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.75■□□□□ 0.27
SLC1A1P43005 IGHV3-62-201ENST00000520057 340 ntBASIC16.75■□□□□ 0.27
SLC1A1P43005 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC1A1P43005 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 AL136982.4-201ENST00000437689 1740 ntBASIC16.75■□□□□ 0.27
SLC1A1P43005 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 AC018892.3-201ENST00000623986 2499 ntBASIC16.75■□□□□ 0.27
SLC1A1P43005 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A1P43005 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC1A1P43005 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A1P43005 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A1P43005 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A1P43005 EEF1DP4-201ENST00000446006 880 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC1A1P43005 AC079140.1-201ENST00000508039 487 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A1P43005 AL121894.2-201ENST00000602977 491 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 AL450472.2-201ENST00000603663 1156 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 AC026979.3-201ENST00000607315 403 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A1P43005 AC084121.4-201ENST00000641598 221 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 AF228730.8-201ENST00000642140 221 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.74■□□□□ 0.27
SLC1A1P43005 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC1A1P43005 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC1A1P43005 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC1A1P43005 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC1A1P43005 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.73■□□□□ 0.27
SLC1A1P43005 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 KRT8P37-201ENST00000451609 1420 ntBASIC16.73■□□□□ 0.27
SLC1A1P43005 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 YBX2P1-201ENST00000394192 760 ntBASIC16.73■□□□□ 0.27
SLC1A1P43005 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC1A1P43005 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC1A1P43005 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.73■□□□□ 0.27
SLC1A1P43005 KRT8P48-201ENST00000515599 1220 ntBASIC16.73■□□□□ 0.27
SLC1A1P43005 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC1A1P43005 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC1A1P43005 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC1A1P43005 C20orf181-201ENST00000623918 480 ntBASIC16.73■□□□□ 0.27
SLC1A1P43005 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms