Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 AL139010.1-201ENST00000454878 894 ntBASIC14.69□□□□□ -0.06
RFC3P40938 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.69□□□□□ -0.06
RFC3P40938 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 AC005225.4-201ENST00000557330 545 ntBASIC14.69□□□□□ -0.06
RFC3P40938 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 AL132655.2-201ENST00000596276 594 ntBASIC14.69□□□□□ -0.06
RFC3P40938 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.69□□□□□ -0.06
RFC3P40938 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RFC3P40938 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.69□□□□□ -0.06
RFC3P40938 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFC3P40938 AL662844.4-201ENST00000606367 2838 ntBASIC14.69□□□□□ -0.06
RFC3P40938 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.69□□□□□ -0.06
RFC3P40938 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.69□□□□□ -0.06
RFC3P40938 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFC3P40938 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.68□□□□□ -0.06
RFC3P40938 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.68□□□□□ -0.06
RFC3P40938 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 SERBP1P3-201ENST00000459980 809 ntBASIC14.68□□□□□ -0.06
RFC3P40938 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.68□□□□□ -0.06
RFC3P40938 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.68□□□□□ -0.06
RFC3P40938 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 AC004790.1-201ENST00000612686 536 ntBASIC14.68□□□□□ -0.06
RFC3P40938 AL033527.5-202ENST00000641632 1098 ntBASIC14.68□□□□□ -0.06
RFC3P40938 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 KRT8P12-202ENST00000472924 1397 ntBASIC14.68□□□□□ -0.06
RFC3P40938 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFC3P40938 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFC3P40938 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RFC3P40938 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.67□□□□□ -0.06
RFC3P40938 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFC3P40938 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RFC3P40938 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.67□□□□□ -0.06
RFC3P40938 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.67□□□□□ -0.06
RFC3P40938 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.67□□□□□ -0.06
RFC3P40938 AC025048.6-201ENST00000634326 1161 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms