Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.25□□□□□ -0.29
SNCAP37840 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.25□□□□□ -0.29
SNCAP37840 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SNCAP37840 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 AL353732.1-201ENST00000569618 1459 ntBASIC13.24□□□□□ -0.29
SNCAP37840 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.24□□□□□ -0.29
SNCAP37840 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.24□□□□□ -0.29
SNCAP37840 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.24□□□□□ -0.29
SNCAP37840 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 KRT18P35-201ENST00000510488 1269 ntBASIC13.24□□□□□ -0.29
SNCAP37840 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.24□□□□□ -0.29
SNCAP37840 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SNCAP37840 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.24□□□□□ -0.29
SNCAP37840 AC006557.2-201ENST00000592985 1240 ntBASIC13.24□□□□□ -0.29
SNCAP37840 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.24□□□□□ -0.29
SNCAP37840 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SNCAP37840 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SNCAP37840 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.24□□□□□ -0.29
SNCAP37840 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SNCAP37840 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SNCAP37840 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 GPAA1P2-202ENST00000606848 1787 ntBASIC13.23□□□□□ -0.29
SNCAP37840 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 AC069224.1-201ENST00000566372 1715 ntBASIC13.23□□□□□ -0.29
SNCAP37840 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.23□□□□□ -0.29
SNCAP37840 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.23□□□□□ -0.29
SNCAP37840 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SNCAP37840 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SNCAP37840 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.23□□□□□ -0.29
SNCAP37840 AC087641.1-201ENST00000557561 1021 ntBASIC13.23□□□□□ -0.29
SNCAP37840 AC091304.2-201ENST00000564639 760 ntBASIC13.23□□□□□ -0.29
SNCAP37840 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.23□□□□□ -0.29
SNCAP37840 CYP2A7P1-201ENST00000595391 815 ntBASIC13.23□□□□□ -0.29
SNCAP37840 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.23□□□□□ -0.29
SNCAP37840 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms