Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.5■□□□□ 0.71
PDE6BP35913 AC005695.3-201ENST00000614522 232 ntBASIC19.5■□□□□ 0.71
PDE6BP35913 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.5■□□□□ 0.71
PDE6BP35913 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDE6BP35913 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDE6BP35913 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.5■□□□□ 0.71
PDE6BP35913 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PDE6BP35913 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 HOMER2P2-201ENST00000451621 847 ntBASIC19.49■□□□□ 0.71
PDE6BP35913 AC091804.1-201ENST00000486888 567 ntBASIC19.49■□□□□ 0.71
PDE6BP35913 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 SCARNA20.5-201ENST00000516991 142 ntBASIC19.49■□□□□ 0.71
PDE6BP35913 ACTG1P17-201ENST00000558391 1119 ntBASIC19.49■□□□□ 0.71
PDE6BP35913 AP006547.1-201ENST00000563435 692 ntBASIC19.49■□□□□ 0.71
PDE6BP35913 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDE6BP35913 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDE6BP35913 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.49■□□□□ 0.71
PDE6BP35913 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDE6BP35913 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6BP35913 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDE6BP35913 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PDE6BP35913 MTX1P1-201ENST00000440904 838 ntBASIC19.48■□□□□ 0.71
PDE6BP35913 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.48■□□□□ 0.71
PDE6BP35913 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.48■□□□□ 0.71
PDE6BP35913 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.48■□□□□ 0.71
PDE6BP35913 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 AL138709.1-201ENST00000614840 1693 ntBASIC19.48■□□□□ 0.71
PDE6BP35913 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PDE6BP35913 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 AC078925.2-201ENST00000624013 1973 ntBASIC19.48■□□□□ 0.71
PDE6BP35913 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.48■□□□□ 0.71
PDE6BP35913 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PDE6BP35913 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDE6BP35913 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6BP35913 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6BP35913 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6BP35913 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6BP35913 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDE6BP35913 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PDE6BP35913 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms