Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.89■□□□□ 0.29
RFC1P35251 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
RFC1P35251 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.89■□□□□ 0.29
RFC1P35251 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RFC1P35251 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.89■□□□□ 0.29
RFC1P35251 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.89■□□□□ 0.29
RFC1P35251 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.89■□□□□ 0.29
RFC1P35251 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 AC134684.3-201ENST00000641758 218 ntBASIC16.89■□□□□ 0.29
RFC1P35251 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.89■□□□□ 0.29
RFC1P35251 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFC1P35251 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFC1P35251 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
RFC1P35251 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFC1P35251 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 RPS8P6-201ENST00000426177 609 ntBASIC16.88■□□□□ 0.29
RFC1P35251 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 AC243562.2-201ENST00000561247 970 ntBASIC16.88■□□□□ 0.29
RFC1P35251 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.88■□□□□ 0.29
RFC1P35251 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC1P35251 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
RFC1P35251 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFC1P35251 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.88■□□□□ 0.29
RFC1P35251 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC1P35251 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFC1P35251 KRT18P13-201ENST00000400056 1290 ntBASIC16.87■□□□□ 0.29
RFC1P35251 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC1P35251 AC254562.1-201ENST00000417586 456 ntBASIC16.87■□□□□ 0.29
RFC1P35251 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.87■□□□□ 0.29
RFC1P35251 RBPMS2P1-201ENST00000437762 623 ntBASIC16.87■□□□□ 0.29
RFC1P35251 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.87■□□□□ 0.29
RFC1P35251 AP006288.1-201ENST00000446065 395 ntBASIC16.87■□□□□ 0.29
RFC1P35251 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms