Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CNGA1P29973 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 BRWD1P1-201ENST00000401091 371 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 FO393414.2-201ENST00000405153 598 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 KLF2P4-201ENST00000451959 1225 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 RN7SL399P-201ENST00000471648 279 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 USP32P1-208ENST00000506594 1164 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.16■□□□□ 0.5
CNGA1P29973 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.16■□□□□ 0.5
CNGA1P29973 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNGA1P29973 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.16■□□□□ 0.5
CNGA1P29973 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 PDIA3P1-201ENST00000471856 1510 ntBASIC18.16■□□□□ 0.5
CNGA1P29973 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.16■□□□□ 0.5
CNGA1P29973 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CNGA1P29973 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNGA1P29973 KRT8P22-201ENST00000562317 1415 ntBASIC18.15■□□□□ 0.5
CNGA1P29973 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.15■□□□□ 0.5
CNGA1P29973 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA1P29973 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.15■□□□□ 0.5
CNGA1P29973 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 CYP4F24P-201ENST00000586049 1580 ntBASIC18.15■□□□□ 0.5
CNGA1P29973 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 MST1L-201ENST00000442552 2185 ntBASIC18.15■□□□□ 0.5
CNGA1P29973 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.15■□□□□ 0.5
CNGA1P29973 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.15■□□□□ 0.5
CNGA1P29973 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNGA1P29973 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.15■□□□□ 0.5
CNGA1P29973 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNGA1P29973 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CNGA1P29973 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CNGA1P29973 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.14■□□□□ 0.49
CNGA1P29973 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.14■□□□□ 0.49
CNGA1P29973 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.14■□□□□ 0.49
CNGA1P29973 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.14■□□□□ 0.49
CNGA1P29973 AC133539.2-201ENST00000604757 467 ntBASIC18.14■□□□□ 0.49
CNGA1P29973 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 CU634019.7-201ENST00000624153 1185 ntBASIC18.14■□□□□ 0.49
CNGA1P29973 FP236241.2-201ENST00000624906 1185 ntBASIC18.14■□□□□ 0.49
CNGA1P29973 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
CNGA1P29973 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 KRT8P44-201ENST00000441609 1350 ntBASIC18.14■□□□□ 0.49
CNGA1P29973 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms