Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 CU634019.7-201ENST00000624153 1185 ntBASIC19.55■□□□□ 0.72
ITGA6P23229 AC018695.7-201ENST00000624587 2492 ntBASIC19.55■□□□□ 0.72
ITGA6P23229 FP236241.2-201ENST00000624906 1185 ntBASIC19.55■□□□□ 0.72
ITGA6P23229 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
ITGA6P23229 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ITGA6P23229 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ITGA6P23229 OR6D1P-203ENST00000641209 4860 ntBASIC19.55■□□□□ 0.72
ITGA6P23229 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.55■□□□□ 0.72
ITGA6P23229 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.55■□□□□ 0.72
ITGA6P23229 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA6P23229 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ITGA6P23229 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ITGA6P23229 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
ITGA6P23229 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ITGA6P23229 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 MIR1909-201ENST00000411312 80 ntBASIC19.54■□□□□ 0.72
ITGA6P23229 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 AL162726.2-201ENST00000438986 1017 ntBASIC19.54■□□□□ 0.72
ITGA6P23229 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA6P23229 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA6P23229 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.54■□□□□ 0.72
ITGA6P23229 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA6P23229 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.54■□□□□ 0.72
ITGA6P23229 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 AL121723.1-201ENST00000445194 1519 ntBASIC19.54■□□□□ 0.72
ITGA6P23229 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA6P23229 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ITGA6P23229 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ITGA6P23229 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA6P23229 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA6P23229 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 INTS4P2-202ENST00000614726 2019 ntBASIC19.53■□□□□ 0.72
ITGA6P23229 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 AC022210.1-201ENST00000449856 793 ntBASIC19.53■□□□□ 0.72
ITGA6P23229 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 USP32P1-208ENST00000506594 1164 ntBASIC19.53■□□□□ 0.72
ITGA6P23229 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.53■□□□□ 0.72
ITGA6P23229 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 AC124283.3-201ENST00000570869 594 ntBASIC19.53■□□□□ 0.72
ITGA6P23229 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 AL049840.4-201ENST00000602422 811 ntBASIC19.53■□□□□ 0.72
ITGA6P23229 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ITGA6P23229 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
ITGA6P23229 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA6P23229 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ITGA6P23229 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA6P23229 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ITGA6P23229 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
ITGA6P23229 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.52■□□□□ 0.72
ITGA6P23229 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA6P23229 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA6P23229 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA6P23229 AC069224.1-201ENST00000566372 1715 ntBASIC19.52■□□□□ 0.72
ITGA6P23229 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms