Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 AL079307.3-201ENST00000556114 283 ntBASIC16.78■□□□□ 0.28
MMP8P22894 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP8P22894 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MMP8P22894 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP8P22894 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MMP8P22894 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
MMP8P22894 AC013268.4-201ENST00000637413 2228 ntBASIC16.77■□□□□ 0.28
MMP8P22894 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP8P22894 TMBIM7P-203ENST00000641617 1718 ntBASIC16.77■□□□□ 0.28
MMP8P22894 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP8P22894 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MMP8P22894 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.77■□□□□ 0.28
MMP8P22894 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP8P22894 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP8P22894 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MMP8P22894 AC009090.5-201ENST00000624886 2285 ntBASIC16.77■□□□□ 0.27
MMP8P22894 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP8P22894 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
MMP8P22894 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP8P22894 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MMP8P22894 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP8P22894 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP8P22894 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
MMP8P22894 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
MMP8P22894 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.76■□□□□ 0.27
MMP8P22894 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.76■□□□□ 0.27
MMP8P22894 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 AP001160.2-201ENST00000596071 487 ntBASIC16.76■□□□□ 0.27
MMP8P22894 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.76■□□□□ 0.27
MMP8P22894 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MMP8P22894 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
MMP8P22894 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 AL607033.1-201ENST00000623900 1599 ntBASIC16.76■□□□□ 0.27
MMP8P22894 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MMP8P22894 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MMP8P22894 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP8P22894 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MMP8P22894 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MMP8P22894 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.75■□□□□ 0.27
MMP8P22894 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms