Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.43■□□□□ 0.38
RFX1P22670 SPCS2P4-201ENST00000436160 681 ntBASIC17.43■□□□□ 0.38
RFX1P22670 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX1P22670 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX1P22670 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX1P22670 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX1P22670 SPTSSB-204ENST00000617024 1292 ntBASIC17.43■□□□□ 0.38
RFX1P22670 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX1P22670 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RFX1P22670 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX1P22670 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX1P22670 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX1P22670 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX1P22670 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.43■□□□□ 0.38
RFX1P22670 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RFX1P22670 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX1P22670 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RFX1P22670 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.42■□□□□ 0.38
RFX1P22670 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.42■□□□□ 0.38
RFX1P22670 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.42■□□□□ 0.38
RFX1P22670 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX1P22670 KRT8P23-201ENST00000560090 1207 ntBASIC17.42■□□□□ 0.38
RFX1P22670 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX1P22670 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX1P22670 MIR6752-201ENST00000618442 71 ntBASIC17.42■□□□□ 0.38
RFX1P22670 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.42■□□□□ 0.38
RFX1P22670 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX1P22670 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX1P22670 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 HLA-V-201ENST00000429037 534 ntBASIC17.41■□□□□ 0.38
RFX1P22670 RN7SL692P-201ENST00000464677 288 ntBASIC17.41■□□□□ 0.38
RFX1P22670 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX1P22670 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.41■□□□□ 0.38
RFX1P22670 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 CR383656.12-201ENST00000549567 513 ntBASIC17.41■□□□□ 0.38
RFX1P22670 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX1P22670 AC061975.2-201ENST00000581722 295 ntBASIC17.41■□□□□ 0.38
RFX1P22670 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.41■□□□□ 0.38
RFX1P22670 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX1P22670 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX1P22670 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms