Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.52■□□□□ 0.56
ERCC3P19447 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC3P19447 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 KRT17P8-201ENST00000540749 863 ntBASIC18.52■□□□□ 0.56
ERCC3P19447 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
ERCC3P19447 AC092337.1-201ENST00000568699 1129 ntBASIC18.52■□□□□ 0.56
ERCC3P19447 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.52■□□□□ 0.56
ERCC3P19447 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.52■□□□□ 0.56
ERCC3P19447 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ERCC3P19447 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.52■□□□□ 0.56
ERCC3P19447 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.52■□□□□ 0.56
ERCC3P19447 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
ERCC3P19447 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ERCC3P19447 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.52■□□□□ 0.55
ERCC3P19447 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.52■□□□□ 0.55
ERCC3P19447 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
ERCC3P19447 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.52■□□□□ 0.55
ERCC3P19447 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.52■□□□□ 0.55
ERCC3P19447 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 NFIC-211ENST00000641145 8399 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 HIST3H2BA-201ENST00000436555 524 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.51■□□□□ 0.55
ERCC3P19447 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 AC106886.1-201ENST00000568660 600 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ERCC3P19447 AC025048.3-201ENST00000590609 569 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.51■□□□□ 0.55
ERCC3P19447 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 AC093726.1-201ENST00000608064 963 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 AC005702.4-201ENST00000618393 416 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.51■□□□□ 0.55
ERCC3P19447 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.51■□□□□ 0.55
ERCC3P19447 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.51■□□□□ 0.55
ERCC3P19447 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ERCC3P19447 CYP4F24P-201ENST00000586049 1580 ntBASIC18.51■□□□□ 0.55
ERCC3P19447 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ERCC3P19447 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 LINC01144-201ENST00000626198 1710 ntBASIC18.5■□□□□ 0.55
ERCC3P19447 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 MIR1909-201ENST00000411312 80 ntBASIC18.5■□□□□ 0.55
ERCC3P19447 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC3P19447 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC3P19447 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC3P19447 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 MIR4321-201ENST00000592276 80 ntBASIC18.5■□□□□ 0.55
ERCC3P19447 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.5■□□□□ 0.55
ERCC3P19447 AC074044.1-201ENST00000609673 707 ntBASIC18.5■□□□□ 0.55
ERCC3P19447 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC3P19447 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.5■□□□□ 0.55
ERCC3P19447 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ERCC3P19447 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC3P19447 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC3P19447 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC3P19447 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ERCC3P19447 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC3P19447 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.49■□□□□ 0.55
ERCC3P19447 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms