Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.19■□□□□ 0.34
CD58P19256 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.19■□□□□ 0.34
CD58P19256 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.19■□□□□ 0.34
CD58P19256 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.19■□□□□ 0.34
CD58P19256 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.19■□□□□ 0.34
CD58P19256 AL645939.2-201ENST00000427340 991 ntBASIC17.19■□□□□ 0.34
CD58P19256 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.19■□□□□ 0.34
CD58P19256 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.19■□□□□ 0.34
CD58P19256 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.19■□□□□ 0.34
CD58P19256 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.19■□□□□ 0.34
CD58P19256 AL133215.2-201ENST00000609242 977 ntBASIC17.19■□□□□ 0.34
CD58P19256 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD58P19256 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.19■□□□□ 0.34
CD58P19256 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.19■□□□□ 0.34
CD58P19256 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD58P19256 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.19■□□□□ 0.34
CD58P19256 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CD58P19256 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
CD58P19256 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 AL035456.1-201ENST00000456064 1369 ntBASIC17.18■□□□□ 0.34
CD58P19256 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.18■□□□□ 0.34
CD58P19256 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.18■□□□□ 0.34
CD58P19256 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.18■□□□□ 0.34
CD58P19256 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.18■□□□□ 0.34
CD58P19256 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CD58P19256 AC107890.1-201ENST00000422478 521 ntBASIC17.18■□□□□ 0.34
CD58P19256 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CD58P19256 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.18■□□□□ 0.34
CD58P19256 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.18■□□□□ 0.34
CD58P19256 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 AC051619.7-201ENST00000568314 623 ntBASIC17.18■□□□□ 0.34
CD58P19256 AL589739.1-201ENST00000607720 493 ntBASIC17.18■□□□□ 0.34
CD58P19256 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.18■□□□□ 0.34
CD58P19256 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.18■□□□□ 0.34
CD58P19256 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
CD58P19256 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD58P19256 AC018892.3-201ENST00000623986 2499 ntBASIC17.18■□□□□ 0.34
CD58P19256 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.17■□□□□ 0.34
CD58P19256 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.17■□□□□ 0.34
CD58P19256 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
CD58P19256 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.17■□□□□ 0.34
CD58P19256 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 AC004987.2-201ENST00000395959 1148 ntBASIC17.17■□□□□ 0.34
CD58P19256 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CD58P19256 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.17■□□□□ 0.34
CD58P19256 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.17■□□□□ 0.34
CD58P19256 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.17■□□□□ 0.34
CD58P19256 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.17■□□□□ 0.34
CD58P19256 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 DUX4L27-201ENST00000554796 1261 ntBASIC17.17■□□□□ 0.34
CD58P19256 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD58P19256 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms