Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.44■□□□□ 0.22
ERCC2P18074 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 KRT8P12-202ENST00000472924 1397 ntBASIC16.44■□□□□ 0.22
ERCC2P18074 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.44■□□□□ 0.22
ERCC2P18074 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 AC125807.1-201ENST00000483097 614 ntBASIC16.44■□□□□ 0.22
ERCC2P18074 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.44■□□□□ 0.22
ERCC2P18074 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 CETN4P-206ENST00000642099 2168 ntBASIC16.44■□□□□ 0.22
ERCC2P18074 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ERCC2P18074 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ERCC2P18074 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ERCC2P18074 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.43■□□□□ 0.22
ERCC2P18074 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.43■□□□□ 0.22
ERCC2P18074 HIST3H2BA-201ENST00000436555 524 ntBASIC16.43■□□□□ 0.22
ERCC2P18074 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 KLF2P3-201ENST00000451977 1087 ntBASIC16.43■□□□□ 0.22
ERCC2P18074 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.43■□□□□ 0.22
ERCC2P18074 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.43■□□□□ 0.22
ERCC2P18074 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 MIR4313-201ENST00000580760 101 ntBASIC16.43■□□□□ 0.22
ERCC2P18074 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.43■□□□□ 0.22
ERCC2P18074 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
ERCC2P18074 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ERCC2P18074 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms