Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PCDH8P1-201ENST00000428983 2773 ntBASIC17.83■□□□□ 0.45
COL11A1P12107 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
COL11A1P12107 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
COL11A1P12107 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COL11A1P12107 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COL11A1P12107 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.83■□□□□ 0.44
COL11A1P12107 AC005695.3-201ENST00000614522 232 ntBASIC17.83■□□□□ 0.44
COL11A1P12107 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COL11A1P12107 MIR6869-201ENST00000619434 62 ntBASIC17.83■□□□□ 0.44
COL11A1P12107 AC138951.2-201ENST00000623455 1161 ntBASIC17.83■□□□□ 0.44
COL11A1P12107 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL11A1P12107 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.83■□□□□ 0.44
COL11A1P12107 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL11A1P12107 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.82■□□□□ 0.44
COL11A1P12107 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 ACTBP11-201ENST00000436287 1126 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 KRT18P25-201ENST00000508931 1278 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.82■□□□□ 0.44
COL11A1P12107 AL645728.2-202ENST00000641679 227 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL11A1P12107 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 AC112504.1-201ENST00000623415 1841 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 MIR326-201ENST00000362220 95 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 YBX1P6-201ENST00000442962 1002 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL11A1P12107 FAM86HP-204ENST00000513466 959 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.82■□□□□ 0.44
COL11A1P12107 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.82■□□□□ 0.44
COL11A1P12107 AC006449.5-201ENST00000610658 2098 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 AC244093.1-201ENST00000610837 814 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 AL138709.1-201ENST00000614840 1693 ntBASIC17.82■□□□□ 0.44
COL11A1P12107 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL11A1P12107 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.82■□□□□ 0.44
COL11A1P12107 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 AC009090.5-201ENST00000624886 2285 ntBASIC17.81■□□□□ 0.44
COL11A1P12107 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.81■□□□□ 0.44
COL11A1P12107 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.81■□□□□ 0.44
COL11A1P12107 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL11A1P12107 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.81■□□□□ 0.44
COL11A1P12107 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.81■□□□□ 0.44
COL11A1P12107 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.81■□□□□ 0.44
COL11A1P12107 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.81■□□□□ 0.44
COL11A1P12107 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.81■□□□□ 0.44
COL11A1P12107 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.81■□□□□ 0.44
COL11A1P12107 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL11A1P12107 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
COL11A1P12107 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
COL11A1P12107 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL11A1P12107 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.8■□□□□ 0.44
COL11A1P12107 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL11A1P12107 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms