Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 MIR648-201ENST00000385046 94 ntBASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 TIMM17BP1-201ENST00000545713 516 ntBASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 AC025048.6-201ENST00000634326 1161 ntBASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRGAP2CP0DJJ0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 LINC02199-201ENST00000506655 2702 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 PHKG1P2-201ENST00000457537 863 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TPRX2P-201ENST00000535362 881 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC023310.3-201ENST00000557027 670 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC100756.1-201ENST00000562736 682 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC138749.3-201ENST00000567691 622 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 LINC01115-203ENST00000606068 577 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC116165.1-201ENST00000611806 668 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AC018892.3-201ENST00000623986 2499 ntBASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SRGAP2CP0DJJ0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 Z97205.2-201ENST00000564697 1639 ntBASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 DFFBP1-201ENST00000433250 979 ntBASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.54■□□□□ 0.4
SRGAP2CP0DJJ0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms