Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC175P0C221 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC175P0C221 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC175P0C221 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC175P0C221 AC107918.4-202ENST00000641623 219 ntBASIC17.34■□□□□ 0.37
CCDC175P0C221 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC175P0C221 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC175P0C221 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC175P0C221 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC175P0C221 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC175P0C221 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC175P0C221 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC175P0C221 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC175P0C221 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
CCDC175P0C221 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC175P0C221 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 KRT18P27-201ENST00000427733 1299 ntBASIC17.33■□□□□ 0.36
CCDC175P0C221 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 FAM210CP-201ENST00000445714 574 ntBASIC17.33■□□□□ 0.36
CCDC175P0C221 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCDC175P0C221 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC175P0C221 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC175P0C221 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC175P0C221 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.33■□□□□ 0.36
CCDC175P0C221 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 OR2I1P-210ENST00000642037 4691 ntBASIC17.33■□□□□ 0.36
CCDC175P0C221 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC175P0C221 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC175P0C221 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC175P0C221 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC175P0C221 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC175P0C221 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC175P0C221 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 AC009090.5-201ENST00000624886 2285 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC175P0C221 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 AC134407.2-201ENST00000625089 1978 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 AC073621.1-201ENST00000392730 636 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC175P0C221 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC175P0C221 AC136632.2-201ENST00000512891 861 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC175P0C221 AC021087.4-201ENST00000563761 564 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 AC087388.1-201ENST00000571370 1112 ntBASIC17.32■□□□□ 0.36
CCDC175P0C221 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CCDC175P0C221 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC175P0C221 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 HMGA1P7-201ENST00000406908 502 ntBASIC17.31■□□□□ 0.36
CCDC175P0C221 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms