Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 SPDYE19P-201ENST00000338590 713 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 PIN1P1-201ENST00000412108 996 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 AC098850.1-201ENST00000419919 790 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 BASP1P1-201ENST00000430708 665 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 AC026979.3-201ENST00000607315 403 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 AL596087.1-201ENST00000400979 1969 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 AC087499.5-201ENST00000452760 1342 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
FREM3P0C091 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 RN7SL837P-201ENST00000463010 287 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 AC092337.1-201ENST00000568699 1129 ntBASIC14.5□□□□□ -0.09
FREM3P0C091 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.5□□□□□ -0.09
FREM3P0C091 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.5□□□□□ -0.09
FREM3P0C091 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.5□□□□□ -0.09
FREM3P0C091 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
FREM3P0C091 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FREM3P0C091 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.5□□□□□ -0.09
FREM3P0C091 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.49□□□□□ -0.09
FREM3P0C091 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 AL391825.1-201ENST00000457671 1364 ntBASIC14.49□□□□□ -0.09
FREM3P0C091 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.49□□□□□ -0.09
FREM3P0C091 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.49□□□□□ -0.09
FREM3P0C091 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.49□□□□□ -0.09
FREM3P0C091 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
FREM3P0C091 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 SPDYE18-201ENST00000510091 1050 ntBASIC14.49□□□□□ -0.09
FREM3P0C091 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.49□□□□□ -0.09
FREM3P0C091 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.49□□□□□ -0.09
FREM3P0C091 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.49□□□□□ -0.09
FREM3P0C091 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 LINC00554-201ENST00000564841 3011 ntBASIC14.49□□□□□ -0.09
FREM3P0C091 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.49□□□□□ -0.09
FREM3P0C091 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FREM3P0C091 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.49□□□□□ -0.09
FREM3P0C091 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.49□□□□□ -0.09
FREM3P0C091 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms