Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLTAP09496 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.53■□□□□ 0.4
CLTAP09496 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 AL080243.2-201ENST00000418783 582 ntBASIC17.53■□□□□ 0.4
CLTAP09496 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.53■□□□□ 0.4
CLTAP09496 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 SPCS2P1-201ENST00000561636 679 ntBASIC17.53■□□□□ 0.4
CLTAP09496 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.53■□□□□ 0.4
CLTAP09496 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.53■□□□□ 0.4
CLTAP09496 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.53■□□□□ 0.4
CLTAP09496 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.53■□□□□ 0.4
CLTAP09496 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 AL691432.1-201ENST00000596308 1422 ntBASIC17.53■□□□□ 0.4
CLTAP09496 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
CLTAP09496 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.53■□□□□ 0.4
CLTAP09496 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLTAP09496 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLTAP09496 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 AL136982.4-201ENST00000437689 1740 ntBASIC17.52■□□□□ 0.4
CLTAP09496 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.52■□□□□ 0.4
CLTAP09496 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.52■□□□□ 0.4
CLTAP09496 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.52■□□□□ 0.4
CLTAP09496 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.52■□□□□ 0.4
CLTAP09496 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
CLTAP09496 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.52■□□□□ 0.4
CLTAP09496 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLTAP09496 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 BCRP1-201ENST00000444246 691 ntBASIC17.52■□□□□ 0.4
CLTAP09496 AL512638.1-201ENST00000457493 794 ntBASIC17.52■□□□□ 0.4
CLTAP09496 INGX-202ENST00000489074 768 ntBASIC17.52■□□□□ 0.4
CLTAP09496 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.52■□□□□ 0.4
CLTAP09496 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.52■□□□□ 0.4
CLTAP09496 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.52■□□□□ 0.4
CLTAP09496 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLTAP09496 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLTAP09496 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CLTAP09496 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLTAP09496 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLTAP09496 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.52■□□□□ 0.39
CLTAP09496 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLTAP09496 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLTAP09496 KRT8P12-202ENST00000472924 1397 ntBASIC17.52■□□□□ 0.39
CLTAP09496 PAUPAR-201ENST00000630360 2965 ntBASIC17.52■□□□□ 0.39
CLTAP09496 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.52■□□□□ 0.39
CLTAP09496 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLTAP09496 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLTAP09496 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.51■□□□□ 0.39
CLTAP09496 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLTAP09496 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 TSSK5P-201ENST00000423978 907 ntBASIC17.51■□□□□ 0.39
CLTAP09496 AL513523.2-202ENST00000427283 2040 ntBASIC17.51■□□□□ 0.39
CLTAP09496 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.51■□□□□ 0.39
CLTAP09496 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 AC243562.2-201ENST00000561247 970 ntBASIC17.51■□□□□ 0.39
CLTAP09496 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLTAP09496 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.51■□□□□ 0.39
CLTAP09496 CYP4F24P-201ENST00000586049 1580 ntBASIC17.51■□□□□ 0.39
CLTAP09496 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms