Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.49□□□□□ -0.25
CD74P04233 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD74P04233 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CD74P04233 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CD74P04233 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.48□□□□□ -0.25
CD74P04233 AC006557.2-201ENST00000592985 1240 ntBASIC13.48□□□□□ -0.25
CD74P04233 MTDHP3-201ENST00000594186 672 ntBASIC13.48□□□□□ -0.25
CD74P04233 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.48□□□□□ -0.25
CD74P04233 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 AC127383.1-201ENST00000444697 1800 ntBASIC13.48□□□□□ -0.25
CD74P04233 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD74P04233 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CD74P04233 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
CD74P04233 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ZBED1P1-201ENST00000502364 1930 ntBASIC13.47□□□□□ -0.25
CD74P04233 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.47□□□□□ -0.25
CD74P04233 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.47□□□□□ -0.25
CD74P04233 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.47□□□□□ -0.25
CD74P04233 SART3-203ENST00000546611 1184 ntBASIC13.47□□□□□ -0.25
CD74P04233 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.47□□□□□ -0.25
CD74P04233 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.47□□□□□ -0.25
CD74P04233 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CD74P04233 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CD74P04233 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CD74P04233 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD74P04233 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms