Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTA1P02549 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTA1P02549 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.44□□□□□ -0.1
SPTA1P02549 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.44□□□□□ -0.1
SPTA1P02549 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTA1P02549 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTA1P02549 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTA1P02549 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SPTA1P02549 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 AZGP1P1-201ENST00000411909 902 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 AP006547.1-201ENST00000563435 692 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTA1P02549 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPTA1P02549 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 HLA-C-210ENST00000640219 976 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTA1P02549 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 PKD1P1-201ENST00000458669 6805 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SPTA1P02549 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTA1P02549 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.43□□□□□ -0.1
SPTA1P02549 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.43□□□□□ -0.1
SPTA1P02549 FNTAP2-201ENST00000430308 634 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 POM121L10P-201ENST00000436994 1285 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 TARDBPP1-201ENST00000442013 1203 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
SPTA1P02549 AC148477.9-201ENST00000623974 539 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.43□□□□□ -0.1
SPTA1P02549 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTA1P02549 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTA1P02549 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 AC006001.1-201ENST00000325130 474 ntBASIC14.42□□□□□ -0.1
SPTA1P02549 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 NKAIN1P1-201ENST00000435754 582 ntBASIC14.42□□□□□ -0.1
SPTA1P02549 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTA1P02549 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTA1P02549 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTA1P02549 MIR3907-201ENST00000579424 151 ntBASIC14.42□□□□□ -0.1
SPTA1P02549 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTA1P02549 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 AC015818.8-201ENST00000587907 1519 ntBASIC14.42□□□□□ -0.1
SPTA1P02549 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SPTA1P02549 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTA1P02549 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.42□□□□□ -0.1
SPTA1P02549 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTA1P02549 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTA1P02549 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms