Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
ABCA1O95477 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ABCA1O95477 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
ABCA1O95477 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 MEP1AP4-201ENST00000423244 1087 ntBASIC13.46□□□□□ -0.26
ABCA1O95477 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.46□□□□□ -0.26
ABCA1O95477 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.46□□□□□ -0.26
ABCA1O95477 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.46□□□□□ -0.26
ABCA1O95477 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.46□□□□□ -0.26
ABCA1O95477 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.46□□□□□ -0.26
ABCA1O95477 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ABCA1O95477 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ABCA1O95477 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 AC005915.1-201ENST00000624912 2018 ntBASIC13.45□□□□□ -0.26
ABCA1O95477 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ABCA1O95477 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 PCDHA14-201ENST00000506751 2298 ntBASIC13.45□□□□□ -0.26
ABCA1O95477 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ABCA1O95477 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
ABCA1O95477 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCA1O95477 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.45□□□□□ -0.26
ABCA1O95477 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 KRT223P-202ENST00000449164 1292 ntBASIC13.45□□□□□ -0.26
ABCA1O95477 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.45□□□□□ -0.26
ABCA1O95477 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 CTBP2P3-201ENST00000585629 1255 ntBASIC13.45□□□□□ -0.26
ABCA1O95477 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.45□□□□□ -0.26
ABCA1O95477 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 AC105020.1-201ENST00000435356 2205 ntBASIC13.45□□□□□ -0.26
ABCA1O95477 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
ABCA1O95477 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
ABCA1O95477 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ABCA1O95477 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.45□□□□□ -0.26
ABCA1O95477 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.44□□□□□ -0.26
ABCA1O95477 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCA1O95477 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCA1O95477 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCA1O95477 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.44□□□□□ -0.26
ABCA1O95477 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.44□□□□□ -0.26
ABCA1O95477 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ABCA1O95477 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 PRAL-201ENST00000624952 3286 ntBASIC13.44□□□□□ -0.26
ABCA1O95477 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.44□□□□□ -0.26
ABCA1O95477 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ABCA1O95477 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ABCA1O95477 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ABCA1O95477 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ABCA1O95477 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms