Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
CDKL5O76039 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDKL5O76039 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.59■□□□□ 0.57
CDKL5O76039 MIR6080-201ENST00000617359 66 ntBASIC18.59■□□□□ 0.57
CDKL5O76039 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.59■□□□□ 0.57
CDKL5O76039 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDKL5O76039 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKL5O76039 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDKL5O76039 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKL5O76039 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CDKL5O76039 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKL5O76039 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKL5O76039 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.58■□□□□ 0.57
CDKL5O76039 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.58■□□□□ 0.57
CDKL5O76039 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKL5O76039 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 AL162727.3-201ENST00000635661 2787 ntBASIC18.58■□□□□ 0.56
CDKL5O76039 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CDKL5O76039 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL5O76039 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.58■□□□□ 0.56
CDKL5O76039 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDKL5O76039 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 AL512356.2-201ENST00000546955 174 ntBASIC18.58■□□□□ 0.56
CDKL5O76039 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.58■□□□□ 0.56
CDKL5O76039 BANF1P1-201ENST00000553684 263 ntBASIC18.58■□□□□ 0.56
CDKL5O76039 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CDKL5O76039 AL596442.2-201ENST00000610240 980 ntBASIC18.58■□□□□ 0.56
CDKL5O76039 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL5O76039 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDKL5O76039 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL5O76039 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDKL5O76039 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL5O76039 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL5O76039 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CDKL5O76039 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.57■□□□□ 0.56
CDKL5O76039 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.57■□□□□ 0.56
CDKL5O76039 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 PHKG1P2-201ENST00000457537 863 ntBASIC18.57■□□□□ 0.56
CDKL5O76039 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL5O76039 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL5O76039 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL5O76039 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.57■□□□□ 0.56
CDKL5O76039 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL5O76039 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL5O76039 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL5O76039 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL5O76039 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL5O76039 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL5O76039 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL5O76039 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL5O76039 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms