Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC004233.3-201ENST00000607794 1269 ntBASIC16.29■□□□□ 0.2
CLDN11O75508 DOC2GP-204ENST00000639052 2548 ntBASIC16.29■□□□□ 0.2
CLDN11O75508 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLDN11O75508 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN11O75508 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN11O75508 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN11O75508 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN11O75508 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CLDN11O75508 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN11O75508 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN11O75508 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN11O75508 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
CLDN11O75508 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN11O75508 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN11O75508 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN11O75508 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN11O75508 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN11O75508 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN11O75508 AC138761.1-201ENST00000584393 385 ntBASIC16.28■□□□□ 0.2
CLDN11O75508 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN11O75508 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN11O75508 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.28■□□□□ 0.2
CLDN11O75508 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN11O75508 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN11O75508 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN11O75508 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CLDN11O75508 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN11O75508 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN11O75508 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 AC074338.1-201ENST00000416825 156 ntBASIC16.27■□□□□ 0.2
CLDN11O75508 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.27■□□□□ 0.2
CLDN11O75508 RPL13P2-201ENST00000440687 659 ntBASIC16.27■□□□□ 0.2
CLDN11O75508 SPDYE18-201ENST00000510091 1050 ntBASIC16.27■□□□□ 0.2
CLDN11O75508 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLDN11O75508 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN11O75508 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN11O75508 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN11O75508 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN11O75508 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN11O75508 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN11O75508 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN11O75508 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN11O75508 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLDN11O75508 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.27■□□□□ 0.19
CLDN11O75508 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN11O75508 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms