Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 AC024909.3-201ENST00000611513 2257 ntBASIC16.79■□□□□ 0.28
OPHN1O60890 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 AC107890.1-201ENST00000422478 521 ntBASIC16.79■□□□□ 0.28
OPHN1O60890 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.79■□□□□ 0.28
OPHN1O60890 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.79■□□□□ 0.28
OPHN1O60890 RN7SL204P-201ENST00000582831 262 ntBASIC16.79■□□□□ 0.28
OPHN1O60890 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.79■□□□□ 0.28
OPHN1O60890 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.79■□□□□ 0.28
OPHN1O60890 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.79■□□□□ 0.28
OPHN1O60890 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
OPHN1O60890 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.79■□□□□ 0.28
OPHN1O60890 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.79■□□□□ 0.28
OPHN1O60890 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 AC125807.1-201ENST00000483097 614 ntBASIC16.78■□□□□ 0.28
OPHN1O60890 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
OPHN1O60890 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
OPHN1O60890 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
OPHN1O60890 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
OPHN1O60890 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
OPHN1O60890 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 MIR648-201ENST00000385046 94 ntBASIC16.77■□□□□ 0.28
OPHN1O60890 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.77■□□□□ 0.28
OPHN1O60890 KRT18P34-201ENST00000488218 1270 ntBASIC16.77■□□□□ 0.28
OPHN1O60890 IGHV3-42-201ENST00000520410 361 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms