Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 LINC02447-202ENST00000501888 2146 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.31□□□□□ -0.12
CXCL13O43927 AC044860.1-202ENST00000559481 777 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 MIR4745-201ENST00000577608 62 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.31□□□□□ -0.12
CXCL13O43927 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 AC024909.3-201ENST00000611513 2257 ntBASIC14.3□□□□□ -0.12
CXCL13O43927 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CXCL13O43927 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCL13O43927 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCL13O43927 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.3□□□□□ -0.12
CXCL13O43927 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.3□□□□□ -0.12
CXCL13O43927 AC009407.1-201ENST00000568958 598 ntBASIC14.3□□□□□ -0.12
CXCL13O43927 AC008738.7-201ENST00000609744 511 ntBASIC14.3□□□□□ -0.12
CXCL13O43927 AL513523.2-202ENST00000427283 2040 ntBASIC14.3□□□□□ -0.12
CXCL13O43927 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.3□□□□□ -0.12
CXCL13O43927 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
CXCL13O43927 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CXCL13O43927 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.29□□□□□ -0.12
CXCL13O43927 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 AL391005.1-201ENST00000623953 2435 ntBASIC14.29□□□□□ -0.12
CXCL13O43927 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCL13O43927 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.29□□□□□ -0.12
CXCL13O43927 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.29□□□□□ -0.12
CXCL13O43927 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 AL450472.2-201ENST00000603663 1156 ntBASIC14.29□□□□□ -0.12
CXCL13O43927 AL109936.8-201ENST00000641772 604 ntBASIC14.29□□□□□ -0.12
CXCL13O43927 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CXCL13O43927 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms